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https://www.arca.fiocruz.br/handle/icict/6863
MST (MOLECULAR SEROTYPING TOOL): A PROGRAM FOR COMPUTER-ASSISTED MOLECULAR IDENTIFICATION OF ESCHERICHIA COLI AND SHIGELLA O ANTIGENS
Author
Affilliation
Fundação Oswaldo Cruz. Center for Excellence in Bioinformatics, Research Center Rene Rachou. Belo Horizonte, MG, Brazil / Fundação Oswaldo Cruz. Genomics and Computational Biology Group, Research Center Rene Rachou. Belo Horizonte, MG, Brazil.
Universite´ d’Evry Val d’Essonne. Evry, France.
Fundação Oswaldo Cruz. Research Center Rene Rachou. Center for Excellence in Bioinformatics. Belo Horizonte, MG, Brazil..
Fundação Oswaldo Cruz. Research Center Rene Rachou. Center for Excellence in Bioinformatics. Belo Horizonte, MG, Brazil / Fundação Oswaldo Cruz. Research Center Rene Rachou. Genomics and Computational Biology Group. Belo Horizonte, MG, Brazil.
Universite´ d’Evry Val d’Essonne. Evry, France.
Fundação Oswaldo Cruz. Research Center Rene Rachou. Center for Excellence in Bioinformatics. Belo Horizonte, MG, Brazil..
Fundação Oswaldo Cruz. Research Center Rene Rachou. Center for Excellence in Bioinformatics. Belo Horizonte, MG, Brazil / Fundação Oswaldo Cruz. Research Center Rene Rachou. Genomics and Computational Biology Group. Belo Horizonte, MG, Brazil.
Abstract
Escherichia colia nd Shigella O antigens can be inferred using therfb-restriction fragment length polymorphism (RFLP) molecular test. We present herein a dynamic programming algorithm-based software to compare therfb-RFLP patterns of clinical isolates with those in a database containing the 171 previously published patterns corresponding to all known E. coli/Shigella O antigens.
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