| Author | Otto, Thomas D. | |
| Author | Gomes, Leonardo H. F. | |
| Author | Ferreira, Marcelo.Alves | |
| Author | Miranda, Antonio B. de | |
| Author | Degrave, Wim M. | |
| Access date | 2019-03-19T10:59:22Z | |
| Available date | 2019-03-19T10:59:22Z | |
| Document date | 2008 | |
| Citation | OTTO, Thomas D. et al. ReRep: Computational detection of repetitive sequences in genome survey sequences (GSS). BMC Informatics, v. 9, n. 366, p. 1-10, Sept. 2008. | pt_BR |
| ISSN | 1471-2105 | pt_BR |
| URI | https://www.arca.fiocruz.br/handle/icict/32139 | |
| Language | eng | pt_BR |
| Publisher | BMC | pt_BR |
| Rights | open access | |
| Subject in Portuguese | Sequências de pesquisa genômica | pt_BR |
| Subject in Portuguese | Detecção computacional | pt_BR |
| Subject in Portuguese | Abordagem ReRep | pt_BR |
| Title | ReRep: computational detection of repetitive sequences in genome survey sequences (GSS) | pt_BR |
| Type | Article | |
| DOI | 10.1186/1471-2105-9-366 | |
| Abstract | Genome survey sequences (GSS) offer a preliminary global view of a genome since, unlike ESTs, they cover coding as well as non-coding DNA and include repetitive regions of the genome. A more precise estimation of the nature, quantity and variability of repetitive sequences very early in a genome sequencing project is of considerable importance, as such data strongly influence the estimation of genome coverage, library quality and progress in scaffold construction. Also, the elimination of repetitive sequences from the initial assembly process is important to avoid errors and unnecessary complexity. Repetitive sequences are also of interest in a variety of other studies, for instance as molecular markers. | pt_BR |
| Affilliation | Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genômica Funcional e Bioinformática. Rio de Janeiro, RJ. Brasil / Fundação Ataulpho de Paiva. Rio de Janeiro, RJ, Brasil. | pt_BR |
| Affilliation | Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genômica Funcional e Bioinformática. Rio de Janeiro, RJ. Brasil / Universidade Federal do Rio de Janeiro. Faculdade de Medicina. Rio de Janeiro, RJ, Brasil. | pt_BR |
| Affilliation | Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genômica Funcional e Bioinformática. Rio de Janeiro, RJ. Brasil. | pt_BR |
| Affilliation | Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genômica Funcional e Bioinformática. Rio de Janeiro, RJ. Brasil. | pt_BR |
| Affilliation | Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genômica Funcional e Bioinformática. Rio de Janeiro, RJ. Brasil. | pt_BR |
| Subject | Genome survey sequences | pt_BR |
| Subject | Computational detection | pt_BR |
| Subject | The ReRep approach | pt_BR |
