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GENOMIC CHARACTERIZATION AND ANTIMICROBIAL RESISTANCE PROFILES OF SALMONELLA ENTERICA SEROVAR INFANTIS ISOLATED FROM FOOD, HUMANS AND VETERINARY-RELATED SOURCES IN BRAZIL
Digitação de sequência multilocus
Plasmídeos
Eletroforese em gel de campo pulsado
Salmonella Infantis
Sequenciamento de todo o genoma
Multilocus sequence typing
Plasmids
Pulsed-field gel electrophoresis
Salmonella Infantis
Whole-genome sequencing
Author
Affilliation
Universidade de São Paulo. Faculdade de Ciências Farmacêuticas de Ribeirão Preto. Departamento de Análises Clínicas, Toxicológicas e Bromatológicas. Ribeirão Preto, SP, Brasil.
Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Rio de Janeiro, RJ, Brasil.
Division of Microbiology, Office of Regulatory Science, Center for Food Safety and Applied Nutrition, U.S. Food and Drug Administration, College Park, Maryland, USA.
Universidade de São Paulo. Faculdade de Ciências Farmacêuticas de Ribeirão Preto. Departamento de Análises Clínicas, Toxicológicas e Bromatológicas. Ribeirão Preto, SP, Brasil.
Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Rio de Janeiro, RJ, Brasil.
Division of Microbiology, Office of Regulatory Science, Center for Food Safety and Applied Nutrition, U.S. Food and Drug Administration, College Park, Maryland, USA.
Universidade de São Paulo. Faculdade de Ciências Farmacêuticas de Ribeirão Preto. Departamento de Análises Clínicas, Toxicológicas e Bromatológicas. Ribeirão Preto, SP, Brasil.
Abstract
Aims: To characterize the genetic relatedness, phenotypic and genotypic antimicrobial
resistance and plasmid content of 80 Salmonella Infantis strains isolated from
food, humans and veterinary sources from 2013 to 2018 in Brazil.
Methods and results: Pulsed-field
gel electrophoresis and single-nucleotide
polymorphism
analysis showed major clusters containing 50% and 38.8% of the strains
studied respectively. Multilocus sequence typing assigned all strains to ST32. Disk-diffusion
revealed that 90% of the strains presented resistant or intermediate resistant
profiles and 38.8% displayed multidrug resistance. Resistance genes for
aminoglycosides (aac(6′)-Iaa;
aadA12; aph(3″-Ib;
aph(6)-Id),
β-lactams
(blaTEM-1;
blaCTX-M-
8;
blaCMY-2),
trimethoprim (dfrA8), tetracycline (tet(A)), amphenicols (floR),
sulfonamide (sul2), efflux pumps (mdsA; mdsB), chromosomal point mutations in
gyrB, parC, acrB and pmrA were detected. Strains harboured IncI, IncF, IncX, IncQ,
IncN and IncR plasmids.
Conclusions: The presence of a prevalent S. Infantis subtype in Brazil and the high
antimicrobial resistance rates reinforced the potential hazard of this serovar for the
public health and food safety fields.
Significance and Impact of the Study: This is the first study characterizing a large
set of S. Infantis from Brazil by whole-genome
sequencing, which provided a better
local and global comprehension about the distribution and characteristics of this serovar
of importance in the food, human and veterinary fields.
Keywords in Portuguese
Genes de resistência antimicrobianaDigitação de sequência multilocus
Plasmídeos
Eletroforese em gel de campo pulsado
Salmonella Infantis
Sequenciamento de todo o genoma
Keywords
Antimicrobial resistance genesMultilocus sequence typing
Plasmids
Pulsed-field gel electrophoresis
Salmonella Infantis
Whole-genome sequencing
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