Please use this identifier to cite or link to this item: https://www.arca.fiocruz.br/handle/icict/66336

Type
Article
Copyright
Open access
Collections
Share

Statistics
Metadata
Show full item record

POOLED COHORT PROFILE: RECODID CONSORTIUM’S HARMONIZED ACUTE FEBRILE ILLNESS ARBOVIRUS META-COHORT
Gómez, Gustavo et al. | Date Issued: 2024
Author
Gómez, Gustavo
Hufstedler, Heather
Morales, Carlos Montenegro
Roell, Yannik
Lozano-Parra, Anyela
Tami, Adriana
Magalhaes, Tereza
Marques, Ernesto T. A.
Balmaseda, Angel
Calvet, Guilherme Amaral
Harris, Eva
Brasil, Patricia
Herrera, Victor
Villar, Luis
Maxwell, Lauren
Jaenisch, Thomas
Affilliation
Universidad Industrial de Santander. Grupo de Epidemiología Clínica. Bucaramanga, Colombia.
Heidelberg Institute of Global Health. Heidelberg University Hospital. Heidelberg, Germany.
Sustainable Sciences Institute. Managua, Nicaragua.
Center for Global Health. Colorado School of Public Health. Aurora, CO, USA.
Universidad Industrial de Santander. Grupo de Epidemiología Clínica. Bucaramanga, Colombia.
Department of Medical Microbiology and Infection Prevention. University Medical Center Groningen. University of Groningen. Groningen, Netherlands / Universidad de Carabobo. Facultad de Ciencias de la Salud. Departamento de Estudios Clínicos. Valencia, Venezuela.
Texas A&M University. Department of Entomology. College Station, TX, USA / Universidade Federal da Bahia. Faculdade de Medicina. Departamento de Medicina Preventiva e Social. Salvador, BA, Brasil.
Oswaldo Cruz Foundation. Aggeu Magalhães Institute. Department of Virology and Experimental Therapeutics. Recife, PE, Brazil / University of Pittsburgh. School of Public Health. Department of Infectious Diseases and Microbiology. Pittsburgh, PA, USA.
Sustainable Sciences Institute. Managua, Nicaragua / Ministry of Health. Centro Nacional de Diagnóstico y Referencia. Laboratorio Nacional de Virología. Managua, Nicaragua.
Fundação Oswaldo Cruz. Instituto Nacional de Infectologia Evandro Chagas. Laboratório de Pesquisa Clínica em Doenças Febris Agudas. Rio de Janeiro, RJ, Brasil.
University of California Berkeley. School of Public Health. Division of Infectious Diseases. Berkeley, CA, USA.
Fundação Oswaldo Cruz. Instituto Nacional de Infectologia Evandro Chagas. Laboratório de Pesquisa Clínica em Doenças Febris Agudas. Rio de Janeiro, RJ, Brasil.
Universidad Industrial de Santander. Grupo de Epidemiología Clínica. Bucaramanga, Colombia.
Universidad Industrial de Santander. Grupo de Epidemiología Clínica. Bucaramanga, Colombia / Centro de Atención y Diagnóstico de Enfermedades Infecciosas. Bucaramanga, Colombia.
Heidelberg Institute of Global Health. Heidelberg University Hospital. Heidelberg, Germany.
Heidelberg Institute of Global Health. Heidelberg University Hospital. Heidelberg, Germany / Center for Global Health. Colorado School of Public Health. Aurora, CO, USA / Heidelberg University Hospital. Department for Infectious Diseases. Section Clinical Tropical Medicine. Heidelberg, Germany.
Abstract
Infectious disease (ID) cohorts are key to advancing public health surveillance, public policies, and pandemic responses. Unfortunately, ID cohorts often lack funding to store and share clinical-epidemiological (CE) data and high-dimensional laboratory (HDL) data long term, which is evident when the link between these data elements is not kept up to date. This becomes particularly apparent when smaller cohorts fail to successfully address the initial scientific objectives due to limited case numbers, which also limits the potential to pool these studies to monitor long-term cross-disease interactions within and across populations. CE data from 9 arbovirus (arthropod-borne viruses) cohorts in Latin America were retrospectively harmonized using the Maelstrom Research methodology and standardized to Clinical Data Interchange Standards Consortium (CDISC). We created a harmonized and standardized meta-cohort that contains CE and HDL data from 9 arbovirus studies from Latin America. To facilitate advancements in cross-population inference and reuse of cohort data, the Reconciliation of Cohort Data for Infectious Diseases (ReCoDID) Consortium harmonized and standardized CE and HDL from 9 arbovirus cohorts into 1 meta-cohort. Interested parties will be able to access data dictionaries that include information on variables across the data sets via Bio Studies. After consultation with each cohort, linked harmonized and curated human cohort data (CE and HDL) will be made accessible through the European Genome-phenome Archive platform to data users after their requests are evaluated by the ReCoDID Data Access Committee. This meta-cohort can facilitate various joint research projects (eg, on immunological interactions between sequential flavivirus infections and for the evaluation of potential biomarkers for severe arboviral disease).
Keywords
Infectious diseases
Harmonized meta-cohort
IPD-MA
Arbovirus
Dengue
Zika
Chikungunya
Surveillance
Public health
Open access data
FAIR principles
Febrile illness
Clinical-epidemiological data
Cross-disease interaction
Epidemiology
Consortium
Innovation
Statistical tool
Latin America
Maelstrom's
Methodology
CDISC
Immunological interaction
Flavivirus
Infection
Arboviral disease
 
Publisher
JMIR Publications
Citation
GÓMEZ, Gustavo et al. Pooled Cohort Profile: ReCoDID Consortium’s Harmonized Acute Febrile Illness Arbovirus Meta-Cohort. JMIR Public Health and Surveillance, v. 10, p. 1-18, Jul. 2024.
DOI
10.2196/54281
ISSN
2369-2960
Notes
Artigo contém errata. DOI 10.2196/64866
Collaborators: ReCoDID Arbovirus harmonization study group: Janet Achieng, Sonia Arguello, Gabriela Maria Marón Alfaro, Till Bärnighausen, Bruno Souza Benevides, Sarah Bethencourt, Andrea Caprara, Priscilla MDG César, Guy Cochrane, Monika Consuegra, Fabio Otero, Kerstin Rosenberger, Anna M Gajewski, Nadim Rahman, Bladimir Cruz, Guillermo Barahona Escobar, Maria I Estupiñán, Isabel Fortier, Rosa Margarita Gélvez Ramírez, María Fernanda Vincenti Gonzalez, Peter W Harrison, Suran Jayathilaka, Guillermina Kuan, Manish Kumar, Luz Marina Leegstra, Erley Ferlipe Lizarazo, Luigi Marongiu, Ágnes Molnár, Cesar Narvaez, Federico Narvaez, Sergio Ojeda, Gabriele Rinck, Ernesto Pleités Sandoval, Frank Tobian, José Victor Zambrana, Luana Damasceno.