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Issue Date	Title	Author(s)	Copyright	Type
2021	COVID-19 epidemic in the Brazilian state of Amazonas was driven by long-term persistence of endemic SARS-CoV-2 lineages and the recent emergence of the new variant of concern P.1.	Naveca, Felipe; Nascimento, Valdinete; Souza, Victor; Corado, André; Nascimento, Fernanda; Silva, George; Costa, Ágatha; Duarte, Débora; Pessoa, Karina; Mejía, Matilde; Brandão, Maria; Jesus, Michele; Gonçalves, Luciana; Costa, Cristiano da; Sampaio, Vanderson; Barros, Daniel; Silva, Marineide; Mattos, Tirza; Pontes, Gemilson; Abdalla, Lígia Fernandes; Santos, João; Arantes, Ighor; Dezordi, Filipe; Siqueira, Marilda; Wallau, Gabriel; Resende, Paola; Delatorre, Edson; Gräff, Tiago; Bello, Gonzalo	open access	Preprint
2021	Three SARS-CoV-2 reinfection cases by the new Variant of Concern (VOC) P.1/501Y.V3	Naveca, Felipe; Costa, Cristiano da; Nascimento, Valdinete; Souza, Victor; Corado, André; Nascimento, Fernanda; Costa, Ágatha; Duarte, Débora; Silva, George; Mejía, Matilde; Pessoa, Karina; Gonçalves, Luciana; Brandão, Maria Júlia; Jesus, Michele; Silva, Marineide; Mattos, Tirza; Abdalla, Lígia Fernandes; Santos, João Hugo; Costa-Filho, Rubens; Sekizuka, Tsuyoshi; Itokawa, Kentaro; Hashino, Masanori; Kuroda, Makoto; Siqueira, Marilda Mendonça; Wallau, Gabriel Luz; Delatorre, Edson; Gräf, Tiago; Bello, Gonzalo; Resende, Paola Cristina	open access	Preprint
2021	SARS-CoV-2 VOCs immune evasion from previously elicited neutralizing antibodies is mainly driven by lower cross-reactivity due to spike RBD electrostatic surface changes.	Ferraz, Matheus V. F.; Moreira, Emerson G.; Coêlho, Danilo F.; Wallau, Gabriel Luz; Lins, Roberto D.	open access	Preprint
2021	Unusual SARS-CoV-2 intra-host diversity reveals lineages superinfection	Dezordi, Filipe Zimmer; Resende, Paola Cristina; Naveca, Felipe Gomes; Nascimento, Valdinete Alves do; Souza, Victor Costa de; Paixão, Anna Carolina Dias; Appolinario, Luciana; Lopes, Renata Serrano; Mendonça, Ana Carolina da Fonseca; Rocha, Alice Sampaio Barreto da; Venas, Taina Moreira Martins; Pereira, Elisa Cavalcante; Salvato, Richard Steiner; Gregianini, Tatiana Schäffer; Martins, Leticia Garay; Pereira, Felicidade Mota; Rovaris, Darcita Buerger; Fernandes, Sandra Bianchini; Rodrigues, Rodrigo Ribeiro; Costa, Thais Oliveira; Sousa Jr., Joaquim Cesar; Miyajima, Fabio; Delatorre, Edson; Gräf, Tiago; Bello, Gonzalo; Siqueira, Marilda Mendonça; Wallau, Gabriel da Luz	open access	Preprint
2021	The ongoing evolution of variants of concern and interest of SARS-CoV-2 in Brazil revealed by convergent indels in the amino (N)-terminal domain of the Spike protein (preprint)	Resende, Paola Cristina; Naveca, Felipe G.; Lins, Roberto D.; Dezordi, Filipe Zimmer; Ferraz, Matheus V. F.; Moreira, Emerson G.; Coêlho, Danilo F.; Motta, Fernando Couto; Paixão, Anna Carolina Dias; Appolinario, Luciana; Lopes, Renata Serrano; Mendonça, Ana Carolina da Fonseca; Rocha, Alice Sampaio Barreto da; Nascimento, Valdinete; Souza, Victor; Silva, George; Nascimento, Fernanda; Lima Neto, Lidio Gonçalves; Riediger, Irina; Debur, Maria do Carmo; Leite, Anderson Brandao; Mattos, Tirza; Costa, Cristiano Fernandes da; Pereira, Felicidade Mota; Cunha, Antonio Ricardo Khouri; Bernardes, André Felipe Leal; Delatorre, Edson; Gräf, Tiago; Siqueira, Marilda Agudo Mendonça Teixeira de; Bello, Gonzalo; Wallau, Gabriel L.; On behalf of Fiocruz COVID-19 Genomic Surveillance Network.	open access	Preprint
2021	Widespread contamination of SARS-CoV-2 on highly touched surfaces in Brazil during the second wave of the COVID-19 pandemic	Silva, Severino Jefferson Ribeiro da; Nascimento, Jéssica Catarine Frutuoso do; Reis, Wendell Palôma Maria dos Santos; Silva, Caroline Targino Alves da; Silva, Poliana Gomes da; Mendes, Renata Pessôa Germano; Mendonça, Allyson Andrade; Santos, Bárbara Nazly Rodrigues; Magalhães, Jurandy Júnior Ferraz de; Kohl, Alain; Pena, Lindomar José	open access	Preprint
2021	A potential SARS-CoV-2 variant of interest (VOI) harboring mutation E484K in the Spike protein was identified within lineage B.1.1.33 circulating in Brazil (preprint)	Resende, Paola Cristina; Gräf, Tiago; Paixão, Anna Carolina Dias da; Appolinario, Luciana Reis; Lopes, Renata Serrano; Mendonça, Ana Carolina da Fonseca; Rocha, Alice Sampaio Barreto da; Motta, Fernando do Couto; Lima Neto, Lidio Gonçalves; Cunha, Antonio Ricardo Khouri; Oliveira, Camila Indiani de; Reis, Pedro Santos Muccillo; Bezerra, João Felipe; Teixeira, Dalane Loudal Florentino; Riediger, Irina Nastassja; Debur, Maria do Carmo; Rodrigues, Rodrigo Ribeiro; Leite, Anderson Brandão; Santos, Cliomar Alves do; Gregianini, Tatiana Schäffer; Fernandes, Sandra Bianchini; Bernardes, André Felipe Leal; Cavalcanti, Andrea Cony; Miyajima, Fábio; Sacchi, Claudio Tavares; Mattos, Tirza Peixoto; Costa, Cristiano Fernandes da; Delatorre, Edson; Wallau, Gabriel da Luz; Naveca, Felipe Gomes; Bello, Gonzalo; Siqueira, Marilda Agudo Mendonça Teixeira de	open access	Preprint
2021	A Sanger-based approach for scaling up screening of SARS-CoV-2 variants of interest and concern	Bezerra, Matheus Filgueira; Machado, Lais Ceschini; Carvalho, Viviane do Carmo Vasconcelos de; Docena, Cássia; Brandão-Filho, Sinval Pinto; Ayres, Constância Flávia Junqueira; Paiva, Marcelo Henrique Santos; Wallau, Gabriel Luz	restricted access	Preprint
2020	Epidemiological and clinical characteristics of the first 557 successive patients with COVID-19 in Pernambuco State, Northeast Brazil	Magalhães, Jurandy Júnior Ferraz de; Mendes, Renata Pessoa Germano; Silva, Caroline Targino Alves da; Silva, Severino Jefferson Ribeiro da; Guarines, Klarissa Miranda; Pena, Lindomar José	open access	Preprint
2020	A word of caution in interpreting Covid-19 diagnostics tests	Silva, Severino Jefferson Ribeiro da; Pena, Lindomar José	open access	Preprint
2020	Discovery of New Hydroxyethylamine Analogs Against 3CLpro Protein Target of SARSCoV-2: Molecular Docking, Molecular Dynamics Simulation and Structure-Activity Relationship Studies	Kumar, Sumit; Sharma, Prem Prakash; Shankar, Uma; Kumar, Dhruv; Joshi, Sanjeev K.; Pena, Lindomar José; Durvasula, Ravi; Kumar, Amit; Kempaiah, Prakasha; Poonam; Rathi, Brijesh	open access	Preprint
2020	Role of Nonstructural Proteins in the Pathogenesis of SARS-CoV-2	Silva, Severino Jefferson Ribeiro da; Silva, Caroline Targino Alves da; Mendes, Renata Pessôa Germano; Pena, Lindomar José	open access	Preprint
2019	High-resolution genome-wide analysis is essential for the identification of ambiguous Aeromonas strains	Melo, Beatriz Souza Toscano de; Mendes-Marques, Carina Lucena; Campos, Túlio de Lima; Almeida, Alzira Maria Paiva de; Leal, Nilma Cintra; Xavier, Danilo Elias	restricted access	Preprint
2019	Novel indol-3-yl-thiosemicarbazone derivatives: Obtaining, evaluation of in vitro leishmanicidal activity and ultrastructural studies	Silva, Paula Roberta da; Oliveira, Jamerson Ferreira de; Silva, Anekécia Lauro da; Queiroz, Camila Marques; Feitosa, Ana Paula Sampaio; Duarte, Denise Maria Figueiredo Araújo; Silva, Aline Caroline da; Castro, Maria Carolina Accioly Brelaz de; Pereira, Valéria Rêgo Alves; Silva, Rosali Maria Ferreira da; Alves, Luiz Carlos; Santos, Fábio André Brayner dos; Lima, Maria do Carmo Alves de	restricted access	Preprint
2019	Use of MALDI-TOF MS to identify the culturable midgut microbiota of laboratory and wild mosquitoes	Gonçalves, Gabriel Gazzoni Araújo; Feitosa, Ana Paula Sampaio; Portela Júnior, Nairomberg Cavalcanti; Oliveira, Cláudia Maria Fontes de; Lima Filho, José Luiz de; Brayner, Fábio André; Alves, Luiz Carlos	restricted access	Preprint
2018	An unsettling explanation for the failure of skatole-baited ovitraps to capture Culex mosquitoes	Paiva, Marcelo H. S.; Barbosa, Rosângela M. R.; Santos, Suzane A.; Silva, Norma M.; Paula, Marcia B.; Ayres, Constância F. J.; Leal, Walter S.	open access	Preprint
2017	The thiopurine nucleoside analogue 6-methylmercaptopurine riboside (6MMPr) effectively blocks zika virus replication	Carvalho, Otavio Valério de; Félix, Daniele Mendes; Mendonça, Leila Rodrigues de; Araújo, Catarina Maria Cataldi Sabino de; Franca, Rafael Freitas de Oliveira; Cordeiro, Marli Tenório; Júnior, Abelardo Silva; Pena, Lindomar José	open access	Preprint